BDgene

SNP Report

Basic Info
Name rs1700679 dbSNP Ensembl
Location chr5:76942684 - 76942684(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.313099
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Ceulemans, S.,2011 A/G Single SNP analyses: Permuted P-value = 0.5287, Odds Ratio=1...... Single SNP analyses: Permuted P-value = 0.5287, Odds Ratio=1.077 More... No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CRHBP corticotropin releasing hormone binding protein 5q13.3 1(0/1/0)

SNPs in LD with rs1700679 (count: 8) View in gBrowse (chr5:76942615..76944022 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 8)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)