SNP Report

Basic Info

Name	rs16940665 dbSNP Ensembl
Location	chrCHR_HSCHR17_2_CTG5:45842149 - 45842149(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.0860623
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; stop_lost; synonymous_variant; upstream_gene_variant; stop_gained.
Consequence to Transcript	3_prime_UTR_variant(ENST00000347197); downstream_gene_variant(ENST00000580955); intron_variant(ENST00000583888, ENST00000634876); NMD_transcript_variant(ENST00000347197, ENST00000583888); non_coding_transcript_exon_variant(ENST00000581479, ENST00000582766); non_coding_transcript_variant(ENST00000581479, ENST00000582766, ENST00000634876); stop_lost(ENST00000619154); synonymous_variant(ENST00000293493, ENST00000314537, ENST00000339069, ENST00000352855, ENST00000398285, ENST00000577353, ENST00000634540); upstream_gene_variant(ENST00000535778, ENST00000580876); stop_gained(ENST00000617446, ENST00000611599, ENST00000613260, ENST00000614143, ENST00000615345, ENST00000618382, ENST00000632383, ENST00000632552, ENST00000631395, ENST00000631395, ENST00000632383, ENST00000634107, ENST00000634181, ENST00000634107, ENST00000634181, ENST00000618144, ENST00000616225, ENST00000616274, ENST00000616748, ENST00000617905, ENST00000621969, ENST00000633723, ENST00000632957, ENST00000633333)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MAPT-AS1	MAPT antisense RNA 1	17q21.31	Mapped by Literature SNP
CRHR1	corticotropin releasing hormone receptor 1	17q21.31	4(2/2/0)

SNPs in LD with rs16940665 (count: 0) View in gBrowse (chrCHR_HSCHR17_2_CTG5:45842149..45842149 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)