BDgene

SNP Report

Basic Info
Name rs1610037 dbSNP Ensembl
Location chr18:910634 - 910634(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.230032
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000579794); downstream_gene_variant(ENST00000269200, ENST00000450565); non_coding_transcript_exon_variant(ENST00000581602); non_coding_transcript_variant(ENST00000581602); upstream_gene_variant(ENST00000577358, ENST00000581719, ENST00000582554)
No. of Studies 2 (Positive: 1; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? YES

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Lohoff, F. W., 2008 (a) A/G Genotypic P-value = 0.937, allelic P-value = 0.931 for BD wh...... Genotypic P-value = 0.937, allelic P-value = 0.931 for BD when compared with controls More... No statistically significant association was found between B...... No statistically significant association was found between BPD and controls for any of the SNPs on the genotypic or allelic level. More... Negative
Soria, V.,2010 X2-tests: allele P-value = 0.044, Model Recessive...... X2-tests: allele P-value = 0.044, Model Recessive, genotype P-value = 0.019, OR(95%CI)=1.83 (1.11-3.01) More... Significant association was found in BD. Significant association was found in BD. Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary) 18p11 3(1/2/0)

SNPs in LD with rs1610037 (count: 0) View in gBrowse (chr18:910634..910634 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Soria, V.,2010 X2-tests:allele P-value > 0.05, genotype P-value > 0.05 in all model No significant association was observed. Negative