SNP Report

Basic Info

Name	rs1579033 dbSNP Ensembl
Location	chr8:32440664 - 32440664(1)
Variant Alleles	G/A/C
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	9.98403E-4
Functional Annotation	intron_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000518104, ENST00000519301, ENST00000520407, ENST00000523534, ENST00000631040); upstream_gene_variant(ENST00000519023)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Goes, F. S., 2009		C	FBAT: additive model, individual P-value = 0.0567(Standard B...... FBAT: additive model, individual P-value = 0.0567(Standard BP), 0.0086(Psychotic BP), 0.1159(Mood-incongruent psychotic BP); dominant model, individual P-value = 0.035(Standard BP), 0.0107(Psychotic BP), 0.3334(Mood-incongruent psychotic BP) More...	Significant association was observed in both standard BP and...... Significant association was observed in both standard BP and Psychotic BP. More...	Positive

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
NRG1	neuregulin 1	8p12	15(10/5/0)
NRG1-IT3	NRG1 intronic transcript 3	8p12	Mapped by Literature SNP

SNPs in LD with rs1579033 (count: 0) View in gBrowse (chr8:32440664..32440664 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)