SNP Report

Basic Info

Name	rs1534877 dbSNP Ensembl
Location	chr22:35258642 - 35258642(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.460463
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000466438); intron_variant(ENST00000216106, ENST00000418170, ENST00000420166, ENST00000455359); NMD_transcript_variant(ENST00000418170); upstream_gene_variant(ENST00000464480, ENST00000498325)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
HMGXB4	HMG box domain containing 4	22q13	1(1/0/0)

SNPs in LD with rs1534877 (count: 0) View in gBrowse (chr22:35258642..35258642 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)