SNP Report

Basic Info

Name	rs149869201 dbSNP Ensembl
Location	chr7:95288582 - 95288582(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.00279553
Functional Annotation	intron_variant; missense_variant. Polyphen Annotation: possibly damaging(ENST00000340694, ENST00000433881); probably damaging(ENST00000289495, ENST00000433360) SIFT Annotation: deleterious(ENST00000340694, ENST00000433881, ENST00000289495, ENST00000433360)
Consequence to Transcript	intron_variant(ENST00000424654, ENST00000456331); missense_variant(ENST00000340694, ENST00000433881, ENST00000289495, ENST00000433360)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Georgi, B., 2014	G/A		GERP=5.61 GERP=5.61	Putative damaging exonic variants found in the five linkage ...... Putative damaging exonic variants found in the five linkage regions. More...	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PPP1R9A	protein phosphatase 1, regulatory subunit 9A	7q21.3	1(0/0/1)

SNPs in LD with rs149869201 (count: 0) View in gBrowse (chr7:95288582..95288582 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)