SNP Report

Basic Info

Name	rs148904927 dbSNP Ensembl
Location	chr10:60073656 - 60073656(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.00299521
Functional Annotation	intron_variant; missense_variant; upstream_gene_variant. Polyphen Annotation: probably damaging(ENST00000280772) SIFT Annotation: deleterious - low confidence(ENST00000280772)
Consequence to Transcript	intron_variant(ENST00000355288, ENST00000373820, ENST00000373827, ENST00000503366, ENST00000511043, ENST00000610321, ENST00000616444); missense_variant(ENST00000280772); upstream_gene_variant(ENST00000610901, ENST00000613207, ENST00000621739)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Fiorentino A., 2014	A/G		eurMLP=0.37 eurMLP=0.37	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ANK3	ankyrin 3, node of Ranvier (ankyrin G)	10q21	17(13/3/1)

SNPs in LD with rs148904927 (count: 0) View in gBrowse (chr10:60073656..60073656 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)