BDgene

SNP Report

Basic Info
Name rs1411187 dbSNP Ensembl
Location chr8:131009717 - 131009717(1)
Variant Alleles G/A
Ancestral Allele A
Minor Allele G
Minor Allele Frequence 0.312101
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000286355, ENST00000377928)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Zandi, P. P., 2008 (b) A/G G FBAT allelic P-value = 6.70E-04 ; Geno-PDT genotypic P-valu...... FBAT allelic P-value = 6.70E-04 ; Geno-PDT genotypic P-value = 1.30E-02 More... None of the SNPs were associated with BP in the single-locus...... None of the SNPs were associated with BP in the single-locus tests at a level that exceeded our threshold for study-wide significance (P<3.00E-05). More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ADCY8 adenylate cyclase 8 (brain) 8q24 4(2/1/1)

SNPs in LD with rs1411187 (count: 35) View in gBrowse (chr8:130990330..131059624 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 35)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016