SNP Report

Basic Info

Name	rs140139253 dbSNP Ensembl
Location	chr3:7146709 - 7146709(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.00339457
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000443259); intron_variant(ENST00000357716, ENST00000389335, ENST00000389336, ENST00000435689, ENST00000440923, ENST00000448328, ENST00000467425, ENST00000486284); NMD_transcript_variant(ENST00000389335, ENST00000435689, ENST00000440923, ENST00000467425)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Kandaswamy R., 2014	T/C		MAF=0.001; P-value=0.787; OR=1.16, 95%CI=0.39-3.47 MAF=0.001; P-value=0.787; OR=1.16, 95%CI=0.39-3.47	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GRM7	glutamate receptor, metabotropic 7	3p26-p25	3(2/1/0)

SNPs in LD with rs140139253 (count: 0) View in gBrowse (chr3:7146709..7146709 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)