SNP Report

Basic Info

Name	rs138881 dbSNP Ensembl
Location	chr22:49826834 - 49826834(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.0605032
Functional Annotation	intron_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000404760); upstream_gene_variant(ENST00000216267, ENST00000404034, ENST00000438393, ENST00000457780, ENST00000459821, ENST00000494833)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Severinsen, J. E., 2006 (b)	G/A		P-value = 0.2473 in BD, P-value = 0.1727 in BD and SZ P-value = 0.2473 in BD, P-value = 0.1727 in BD and SZ		Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
BRD1	bromodomain containing 1	22q13.33	2(2/0/0)

SNPs in LD with rs138881 (count: 0) View in gBrowse (chr22:49826834..49826834 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Severinsen, J. E., 2006 (b)	P-value = 0.2896 in SZ, P-value = 0.1727 in BD and SZ		Negative

Overlap with MDD from cross-disorder studies (count: 0)