BDgene

SNP Report

Basic Info
Name rs137932 dbSNP Ensembl
Location chr22:50085971 - 50085971(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.327875
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000262794, ENST00000311597, ENST00000395854, ENST00000395858, ENST00000395876, ENST00000419054, ENST00000442311, ENST00000475190, ENST00000540615, ENST00000545383)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? YES
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Severinsen, J. E., 2006 (b) G/A P-value = 0.3229 in BD, P-value = 0.6327 in BD and SZ P-value = 0.3229 in BD, P-value = 0.6327 in BD and SZ Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
MOV10L1 Mov10 RISC complex RNA helicase like 1 22q13.33 1(0/1/0)
MLC1 megalencephalic leukoencephalopathy with subcortical cysts 1 22q13.33 5(1/4/0)

SNPs in LD with rs137932 (count: 0) View in gBrowse (chr22:50085971..50085971 )

Overlap with SZ from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Severinsen, J. E., 2006 (b) P-value = 0.7615 in SZ, P-value = 0.6327 in BD and SZ Negative

Overlap with MDD from cross-disorder studies (count: 0)