BDgene

SNP Report

Basic Info
Name rs137252 dbSNP Ensembl
Location chr22:34751267 - 34751267(1)
Variant Alleles G/T
Ancestral Allele G
Minor Allele T
Minor Allele Frequence 0.0798722
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Potash, J. B., 2008 G/T Family-based P-value = 0.01 for all BPAD subjects, family-ba...... Family-based P-value = 0.01 for all BPAD subjects, family-based P-value = 0.025 for BPAD subjects with psychotic symptoms.Case-control P-value = 0.43 for all BPAD subjects, case-control P-value = 0.73 for BPAD subjects with psychotic symptoms. More... Positive

SNP related genes (count: 0)

SNPs in LD with rs137252 (count: 34) View in gBrowse (chr22:34751267..34809694 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 34)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016