||chr22:40678403 - 40678403(1)
|Minor Allele Frequence
|Consequence to Transcript
||upstream_gene_variant(ENST00000249016, ENST00000381433, ENST00000442317, ENST00000465662, ENST00000498400)
|No. of Studies
||2 (Positive: 0; Negative: 2; Trend: 0)
|Overlap with SZ?
|Overlap with MDD?
SNP related studies (count: 2)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
SNP related genes (count: 2)
Literature-origin SNPs (count: 0)
LD-proxies (count: 4)
Overlap with SZ from cross-disorder studies (count: 1)
|Severinsen, J. E., 2006 (a)
||CLUMP T1 P-value = 0.0197, CLUMP T4 P-value = 0.0197 for SZ; CLUMP T1 P-value = 0.1461, CLUMP T4 P-value = 0.1461 for BPD and SZ in the Faeroese Sample; Empirical overall P-value = 0.8145 for SZ in the Case-Control Sample From Scotland; Empirical overall P-value = 0.8538 for BPD and SZ in the Case-Control Sample From Scotland
||The three GPR24 SNPs rs133068, rs133069, and rs133073 showed association with SZ yielding P-values of 0.008-0.02.
Overlap with MDD from cross-disorder studies (count: 0)