SNP Report

Basic Info

Name	rs12899449 dbSNP Ensembl
Location	chr15:38703290 - 38703290(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.167532
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000318792)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Ferreira, M. A.,2008		G	Imputed P value=3.5E-08, OR=0.836 in the combined analysis o...... Imputed P value=3.5E-08, OR=0.836 in the combined analysis of WTCCC, STEP-UCL and ED-DUB-STEP2 datasets. Imputed P value=0.014 in the WTCCC. Imputed P value=0.0005 in the STEP-UCL. Imputed P value=0.0013 in the ED-DUB-STEP2 dataset. More...		Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
C15orf53	chromosome 15 open reading frame 53	15q14	3(0/1/2)

SNPs in LD with rs12899449 (count: 0) View in gBrowse (chr15:38703290..38703290 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)