SNP Report

Basic Info

Name	rs12890287 dbSNP Ensembl
Location	chr14:57654927 - 57654927(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.192492
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000556568, ENST00000556826, ENST00000557430); non_coding_transcript_variant(ENST00000556568, ENST00000557430)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Jiang, Y.,2011			Non-weighted test under H0: P-value(additive)=0.0000206, P-v...... Non-weighted test under H0: P-value(additive)=0.0000206, P-value(dominant)=0.000011, P-value(recessive)=0.385; weighted test under H'0: P-value(additive)=0.00000709, P-value(dominant)=0.00000263, P-value(recessive)=0.463; logistic regression: P-value(additive)=0.0000152, P-value(dominant)=0.00000613, P-value(recessive)=0.491 More...	Suggestive association was found. Suggestive association was found.	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SLC35F4	solute carrier family 35, member F4	14q22.3	Mapped by Literature SNP

SNPs in LD with rs12890287 (count: 0) View in gBrowse (chr14:57654927..57654927 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)