SNP Report

Basic Info

Name	rs12488461 dbSNP Ensembl
Location	chr3:52664401 - 52664401(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.311302
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000449505, ENST00000450271); intron_variant(ENST00000296302, ENST00000337303, ENST00000356770, ENST00000394830, ENST00000409057, ENST00000409114, ENST00000409767, ENST00000410007, ENST00000412587, ENST00000420148, ENST00000423351, ENST00000431678, ENST00000446103); NMD_transcript_variant(ENST00000412587)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
PBRM1	polybromo 1	3p21	5(4/0/1)

SNPs in LD with rs12488461 (count: 0) View in gBrowse (chr3:52664401..52664401 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)