BDgene

SNP Report

Basic Info
Name rs11748890 dbSNP Ensembl
Location chr5:153755846 - 153755846(1)
Variant Alleles C/A
Ancestral Allele A
Minor Allele C
Minor Allele Frequence 0.28115
Functional Annotation downstream_gene_variant; intron_variant.
Consequence to Transcript downstream_gene_variant(ENST00000476596); intron_variant(ENST00000285900, ENST00000340592, ENST00000448073, ENST00000518142, ENST00000518783, ENST00000521843)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GRIA1 glutamate receptor, ionotropic, AMPA 1 5q33 2(2/0/0)
RN7SL177P RNA, 7SL, cytoplasmic 177, pseudogene 5q33.2 Mapped by Literature SNP

SNPs in LD with rs11748890 (count: 0) View in gBrowse (chr5:153755846..153755846 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)