BDgene

SNP Report

Basic Info
Name rs11724817 dbSNP Ensembl
Location chr4:186668644 - 186668644(1)
Variant Alleles A/T
Ancestral Allele A
Minor Allele T
Minor Allele Frequence 0.227636
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000441802, ENST00000614102)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Abou Jamra, R, 2008 (a) A/T allelic P-value = 0.63848 allelic P-value = 0.63848 showed no association with bipolar affective disorder showed no association with bipolar affective disorder Negative

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CD36 CD36 molecule (thrombospondin receptor) 7q11.2 3(2/1/0)
FAT1 FAT atypical cadherin 1 4q35.2 Mapped by Literature SNP

SNPs in LD with rs11724817 (count: 2) View in gBrowse (chr4:186668644..186670688 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)