BDgene

SNP Report

Basic Info
Name rs11191560 dbSNP Ensembl
Location chr10:103109281 - 103109281(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.151558
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000470299); intron_variant(ENST00000343289, ENST00000369857, ENST00000404739, ENST00000452156, ENST00000461461, ENST00000487810); NMD_transcript_variant(ENST00000452156, ENST00000461461); non_coding_transcript_variant(ENST00000369857, ENST00000487810); upstream_gene_variant(ENST00000458345, ENST00000470228, ENST00000481549, ENST00000552185)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NT5C2 5'-nucleotidase, cytosolic II 10q24.32 2(2/0/0)

SNPs in LD with rs11191560 (count: 0) View in gBrowse (chr10:103109281..103109281 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)