SNP Report

Basic Info

Name	rs11150746 dbSNP Ensembl
Location	chr17:80787589 - 80787589(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.279952
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000306801, ENST00000544334, ENST00000570891, ENST00000574767, ENST00000575542, ENST00000577161); NMD_transcript_variant(ENST00000574767); non_coding_transcript_variant(ENST00000575542, ENST00000577161)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Rajkumar, A. P., 2014			P-value=0.0274, OR=1.061 P-value=0.0274, OR=1.061	RegulomeDB annotates that nominally significant SNP rs111507...... RegulomeDB annotates that nominally significant SNP rs11150746 in RPTOR regulates RNF213. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
RPTOR	regulatory associated protein of MTOR, complex 1	17q25.3	2(1/1/0)

SNPs in LD with rs11150746 (count: 0) View in gBrowse (chr17:80787589..80787589 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)