BDgene

SNP Report

Basic Info
Name rs10982292 dbSNP Ensembl
Location chr9:114563011 - 114563011(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.0419329
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Sklar, P., 2008 A/G CMH (Cochran-Mantel-Haenszel) P-value = 3.32E-05, allelic P-...... CMH (Cochran-Mantel-Haenszel) P-value = 3.32E-05, allelic P-value = 2.86E-05, OR=1.82, pSNP test P-value = 2.52E-05, pHAP test P-value = 6.81E-06, r2=0.77 More... Trend

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 9q33.1 1(0/0/1)

SNPs in LD with rs10982292 (count: 0) View in gBrowse (chr9:114563011..114563011 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016