BDgene

SNP Report

Basic Info
Name rs10914458 dbSNP Ensembl
Location chr1:31631145 - 31631145(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.442093
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000373706, ENST00000403528, ENST00000468521, ENST00000471219, ENST00000472443, ENST00000492061, ENST00000496805); intron_variant(ENST00000373703, ENST00000373705, ENST00000461006, ENST00000478502, ENST00000489164); non_coding_transcript_variant(ENST00000461006, ENST00000478502, ENST00000489164)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PEF1 penta-EF-hand domain containing 1 1p34 Mapped by LD-proxy
HCRTR1 hypocretin (orexin) receptor 1 1p33 1(1/0/0)

SNPs in LD with rs10914458 (count: 0) View in gBrowse (chr1:31631145..31631145 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)