BDgene

SNP Report

Basic Info
Name rs10865973 dbSNP Ensembl
Location chr3:52684138 - 52684138(1)
Variant Alleles A/T
Ancestral Allele A
Minor Allele T
Minor Allele Frequence 0.3125
Functional Annotation intron_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000394830, ENST00000420148, ENST00000424867, ENST00000431678, ENST00000439181, ENST00000449505, ENST00000450271, ENST00000458294, ENST00000479230); upstream_gene_variant(ENST00000296302, ENST00000337303, ENST00000356770, ENST00000394799, ENST00000409057, ENST00000409114, ENST00000409767, ENST00000410007, ENST00000412587, ENST00000418458, ENST00000423351, ENST00000460073, ENST00000462550, ENST00000468146, ENST00000468885, ENST00000474423, ENST00000484022, ENST00000492349, ENST00000496254, ENST00000516978, ENST00000630615)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 3p21.1 2(2/0/0)
PBRM1 polybromo 1 3p21 5(4/0/1)

SNPs in LD with rs10865973 (count: 0) View in gBrowse (chr3:52684138..52684138 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)