SNP Report

Basic Info

Name	rs10807187 dbSNP Ensembl
Location	chr6:37661874 - 37661874(1)
Variant Alleles	G/A/T
Ancestral Allele	G
Minor Allele	T
Minor Allele Frequence	0.263379
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000434837, ENST00000478143, ENST00000505425, ENST00000508399, ENST00000515437); non_coding_transcript_variant(ENST00000478143)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	YES

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Li, J.,2011(a)	G/T		Single SNP analyses: allele, P-value = 0.0791, OR[95%CI]=1.1...... Single SNP analyses: allele, P-value = 0.0791, OR[95%CI]=1.1199[0.9869, 1.2708], genotype, P-value = 0.2005 for BP More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MDGA1	MAM domain containing glycosylphosphatidylinositol anchor 1	6p21	1(1/0/0)

SNPs in LD with rs10807187 (count: 0) View in gBrowse (chr6:37661874..37661874 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Li, J.,2011(a)	Single SNP analyses:allele, P-value = 0.848, OR[95%CI]=0.9877[0.8702, 1.1211], genotype, P-value = 0.7578 for SZ	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Li, J.,2011(a)	Single SNP analyses:allele, P-value = 0.8324, OR[95%CI]=1.0137[0.8937, 1.1498], genotype, P-value = 0.8088 for MDD	No significant association was observed.	Negative