SNP Report

Basic Info

Name	rs1053593 dbSNP Ensembl
Location	chr22:35264882 - 35264882(1)
Variant Alleles	G/C/T
Ancestral Allele	G
Minor Allele	T
Minor Allele Frequence	0.452476
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; missense_variant; NMD_transcript_variant. Polyphen Annotation: benign(ENST00000420166, ENST00000455359, ENST00000216106) SIFT Annotation: deleterious(ENST00000420166' target='_blank'>ENST00000420166, ENST00000455359' target='_blank'>ENST00000455359); deleterious - low confidence(ENST00000216106' target='_blank'>ENST00000216106); tolerated(ENST00000420166' target='_blank'>ENST00000420166, ENST00000455359' target='_blank'>ENST00000455359); tolerated - low confidence(ENST00000216106' target='_blank'>ENST00000216106)
Consequence to Transcript	3_prime_UTR_variant(ENST00000418170); downstream_gene_variant(ENST00000464480, ENST00000498325); missense_variant(ENST00000420166, ENST00000455359, ENST00000216106, ENST00000420166, ENST00000455359, ENST00000216106); NMD_transcript_variant(ENST00000418170)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
HMGXB4	HMG box domain containing 4	22q13	1(1/0/0)

SNPs in LD with rs1053593 (count: 0) View in gBrowse (chr22:35264882..35264882 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)