BDgene

SNP Report

Basic Info
Name rs10509016 dbSNP Ensembl
Location chr10:54651634 - 54651634(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.113019
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000320301, ENST00000361849, ENST00000373955, ENST00000373956, ENST00000373957, ENST00000373965, ENST00000395430, ENST00000395432, ENST00000395433, ENST00000395438, ENST00000395440, ENST00000395442, ENST00000395445, ENST00000395446, ENST00000409834, ENST00000414367, ENST00000414778, ENST00000422842, ENST00000437009, ENST00000448885, ENST00000458638, ENST00000495484, ENST00000612394, ENST00000613346, ENST00000613657, ENST00000614895, ENST00000616114, ENST00000617051, ENST00000617271, ENST00000621708, ENST00000622048); NMD_transcript_variant(ENST00000373956, ENST00000414367, ENST00000448885); non_coding_transcript_variant(ENST00000422842)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PCDH15 protocadherin-related 15 10q21.1 4(2/1/1)

SNPs in LD with rs10509016 (count: 0) View in gBrowse (chr10:54651634..54651634 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)