SNP Report

Basic Info

Name	rs1017180 dbSNP Ensembl
Location	chr19:13083958 - 13083958(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.461861
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000585382, ENST00000625100); intron_variant(ENST00000358552, ENST00000360105, ENST00000397661, ENST00000585575, ENST00000586797, ENST00000587260, ENST00000587760, ENST00000588228, ENST00000592199); NMD_transcript_variant(ENST00000586797)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
NFIX	nuclear factor I/X (CCAAT-binding transcription factor)	19p13.3	4(0/3/1)

SNPs in LD with rs1017180 (count: 0) View in gBrowse (chr19:13083958..13083958 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)