BDgene

SNP Report

Basic Info
Name rs1016732 dbSNP Ensembl
Location chr1:160117178 - 160117178(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.190695
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000361216, ENST00000392233, ENST00000472488, ENST00000478587, LRG_6t1); non_coding_transcript_variant(ENST00000472488, ENST00000478587)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Goldstein, I.,2009 A/G Single SNP association: additive model: FBAT P-value = 0.039...... Single SNP association: additive model: FBAT P-value = 0.0393; dominant model: FBAT P-value = 0.006; recessive model: FBAT P-value = 0.0066 More... The SNP was significantly associated with BD in several mode...... The SNP was significantly associated with BD in several modes. More... Positive

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide 1q23.2 1(1/0/0)
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide 1p13 1(1/0/0)

SNPs in LD with rs1016732 (count: 0) View in gBrowse (chr1:160117178..160117178 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)