BDgene

Core Gene from Gene Prioritization Pathways from PBA (Pathway-based Analysis) Enriched Pathways for Core Genes Enriched Pathways for Cross-disorder Genes

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GO Report

Basic Info

ID	GO:0033077
Name	T cell differentiation in thymus
Type	biological process
No. of Genes in BDgene	3
Source	Pathway by PBA

PBA Result

Pathway Name in Paper	Source	Reference	Data Set	Tool	Result Parameters	Result Link
GO:33077: T cell differentiation in the thymus	PBA paper	Holmans, P., 2009	WTCCC+STEP-UCL+ED-DUB-STEP2	ALIGATOR (Association LIst Go AnnoTatOR)	PROCESS, cutoff for significant SNPs: p < 0.01

GO related genes in BDgene (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)	Evidence[PMID]
GLI3	GLI family zinc finger 3	7p13	1(1/0/0)	ISS
XRCC4	X-ray repair complementing defective repair in Chinese hamster cells 4	5q14.2	1(0/1/0)	IEA
BCL2	B-cell CLL/lymphoma 2	18q21.3	2(0/2/0)	IEA