BDgene

Gene Report

Basic Info
Approved Symbol DSCAM
Symbol Alias CHD2-42, CHD2-52
Approved Name Down syndrome cell adhesion molecule
Location 21q22.2-q22.3
Position chr21:40010999-40847139, -1
External Links HGNC: 3039
Entrez Gene: 1826
Ensembl: ENSG00000171587
UCSC: uc002yyq.1
No. of Studies 3 (Positive: 1; Negative: 2; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 3)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Amano, K., 2008 SNP: rs1040315, rs16999204, rs1983527, rs2010513, rs2297263, rs2297270, rs2837399, rs2837409, rs2837500, rs34336407, rs420863, rs7275294, rs7275460, rs764887, rs909185, rs914163 our current findings suggest the possible genetic contribution of DSCAM gene to the manifestation of bipolar disorder Positive Comment on Study
Graae, L.,2012 SNP: rs6517590 No significant association was observed in BD. Negative Comment on Study
Xu, W., 2014 SNP: rs2837475 The SNP within or near this gene did not achieve genome-wide significance. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 16)

GO terms by PBA (count: 5)

GO terms by database search (count: 11)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 1)

Related other genetic factors
Gene related SNPs (count: 161)

Literature-origin SNPs (count: 18)

LD-proxies (count: 143)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr21:40010999..40847139 View in gBrowse
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