Gene Report

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Basic Info

Approved Symbol	CACNA1C-IT2
Approved Name	CACNA1C intronic transcript 2
Previous Name	CACNA1C intronic transcript 2 (non-protein coding)
Location	12p13.33
Position	chr12:2048352-2049463, 1
External Links	HGNC: 41313 Entrez Gene: 100874369 Ensembl: ENSG00000256257
No. of Studies	0. Gene is from "Mapped by Literature SNP "

Gene functional annotation

Gene related GO terms (count: 0)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 6)

rs_ID	Location	Functional Annotation	No. of Studies (Positive/Negative/Trend)
rs181910852	chr12:2052882 - 2052882(1)	downstream_gene_variant; intron_variant; upstream_gene_variant	1(0/1/0)
rs723672	chr12:2052395 - 2052395(1)	downstream_gene_variant; intron_variant; upstream_gene_variant	2(0/2/0)
rs75639014	chr12:2052476 - 2052476(1)	downstream_gene_variant; intron_variant; upstream_gene_variant	1(0/1/0)
rs190532500	chr12:2052702 - 2052702(1)	downstream_gene_variant; intron_variant; upstream_gene_variant	1(0/1/0)

rs_ID	Literature-origin SNPs with LD	Location	Functional Annotation
rs2429150		chr12:2043489 - 2043489(1)	intron_variant; upstream_gene_variant
rs765125		chr12:2047041 - 2047041(1)	intron_variant; upstream_gene_variant

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 0)

View in gBrowse

Region: chr12:2048352..2049463 View in gBrowse