BDgene

BD & SZ & MDD shared SNPs from cross-disorder studies

Total result: 186

SNP Related Gene(s) No. of Studies (Positive/Trend/Negative) for BD No. of Studies for SZ Overlap with SZ No. of Studies for MDD Overlap with MDD
Result Category Reference
Result Category Reference
rs2391191 DAOA DAOA-AS1 18(3/0/15) 7
Positive Schumacher, J.,2004
Positive Muller, D. J.,2011
3
Negative Gawlik, M.,2010
Negative Tan, J., 2014
rs6265 BDNF BDNF-AS 17(7/0/10) 3
Positive Neves-Pereira, M.,2005
Negative Kanazawa, T., 2007
1
Negative Schumacher, J.,2005
rs1006737 CACNA1C 15(9/2/4) 4
Positive Andreassen OA, 2013
Positive Green, E. K., 2010
3
Positive Green, E. K., 2010
Trend Liu, Y.,2011
rs1935062 DAOA DAOA-AS1 12(6/0/6) 2
Negative Schumacher, J.,2004
Positive Detera-Wadleigh, S. D., 2006
1
Negative Gawlik, M.,2010
rs10994336 ANK3 12(7/0/5) 4
Negative Gella, A.,2011
Positive Lim C.H., 2014
1
Trend Liu, Y.,2011
rs3918342 DAOA 11(4/0/7) 3
Positive Detera-Wadleigh, S. D., 2006
Positive Bass, N. J.,2009
2
Negative Tan, J., 2014
Negative Gawlik, M.,2010
rs947267 DAOA DAOA-AS1 9(1/0/8) 3
Negative Bass, N. J.,2009
Negative Detera-Wadleigh, S. D., 2006
2
Negative Tan, J., 2014
Negative Gawlik, M.,2010
rs1170191 DGKH 7(1/0/6) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs1935058 DAOA-AS1 DAOA 7(3/0/4) 2
Negative Williams, N. M., 2006
Positive Detera-Wadleigh, S. D., 2006
1
Negative Gawlik, M.,2010
rs165599 ARVCF COMT 7(5/0/2) 2
Positive Shifman, S., 2004
Negative Funke, B.,2005
2
Negative Massat, I.,2011
Negative Funke, B.,2005
rs1012053 DGKH 6(1/0/5) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs1801260 CLOCK TMEM165 6(3/0/3) 1
Negative Kishi, T.,2009(a)
3
Negative Kishi, T.,2011(c)
Negative Kishi, T.,2009(a)
rs9315885 DGKH MAPK6PS3 6(0/0/6) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs4680 COMT 6(3/0/3) 2
Positive Shifman, S., 2004
Negative Funke, B.,2005
2
Positive Massat, I.,2011
Negative Funke, B.,2005
rs3738401 DISC1 TSNAX 5(0/0/5) 2
Negative Ram Murthy, A., 2012
Negative Thomson, P. A.,2005(a)
1
Negative Schosser, A., 2010
rs737865 COMT TXNRD2 5(2/0/3) 2
Positive Shifman, S., 2004
Negative Funke, B.,2005
2
Negative Massat, I.,2011
Negative Funke, B.,2005
rs2251219 PBRM1 SMIM4 RNU6-856P 5(5/0/0) 2
Negative Vassos, E.,2012
Positive Kondo, K.,2013
2
Positive Major Depressive Disorder Working Group of the Psychiatric, G. C., 2013
Positive McMahon, F. J., 2010
rs9371601 SYNE1 5(4/1/0) 1
Positive Andreassen OA, 2013
1
Positive Green EK, 2013
rs766288 TSNAX DISC1 4(1/0/3) 2
Negative Thomson, P. A.,2005(a)
Positive Ram Murthy, A., 2012
2
Negative Okuda, A.,2010
Negative Schosser, A., 2010
rs1000731 DISC1 TSNAX 4(0/0/4) 1
Negative Thomson, P. A.,2005(a)
1
Negative Schosser, A., 2010
rs6313 HTR2A 4(0/0/4) 1
Negative Tan J., 2014
2
Negative Tan J., 2014
Negative Kishi, T.,2009(b)
rs6675281 DISC1 TSNAX 4(0/0/4) 1
Negative Thomson, P. A.,2005(a)
1
Negative Schosser, A., 2010
rs3916966 DAOA-AS1 DAOA 4(1/0/3) 1
Positive Detera-Wadleigh, S. D., 2006
1
Negative Gawlik, M.,2010
rs1982350 ARNTL 3(2/0/1) 1
Positive Mansour, H. A., 2006
1
Negative Soria, V.,2010
rs1630250 TSNAX DISC1 3(0/0/3) 1
Negative Thomson, P. A.,2005(a)
1
Negative Okuda, A.,2010
rs2535629 ITIH3 3(3/0/0) 2
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
Positive Andreassen OA, 2013
2
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
Positive Major Depressive Disorder Working Group of the Psychiatric, G. C., 2013
rs2492367 DISC1 TSNAX 3(1/0/2) 1
Negative Thomson, P. A.,2005(a)
1
Negative Schosser, A., 2010
rs6903874 TAAR6 3(1/0/2) 1
Positive Pae, C. U., 2008
1
Negative Pae, C. U., 2008
rs2278749 ARNTL 3(1/0/2) 1
Negative Mansour, H. A., 2006
1
Negative Soria, V.,2010
rs3736544 CLOCK TMEM165 3(1/0/2) 1
Negative Kishi, T.,2009(a)
2
Positive Kishi, T.,2011(c)
Negative Kishi, T.,2009(a)
rs821597 DISC1 TSNAX 3(0/0/3) 1
Negative Thomson, P. A.,2005(a)
1
Negative Schosser, A., 2010
rs646558 NCAM1 3(1/0/2) 1
Positive Atz, M. E., 2007
1
Negative Arai, M., 2004
rs1997644 CSNK1E 3(2/0/1) 2
Negative Matsunaga, S.,2012
Negative Mansour, H. A.,2009
2
Negative Matsunaga, S.,2012
Negative Soria, V.,2010
rs9315897 DGKH 3(0/0/3) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs988748 BDNF 2(0/0/2) 1
Negative Schumacher, J.,2005
1
Negative Schumacher, J.,2005
rs969486 ARNTL 2(1/0/1) 1
Negative Mansour, H. A., 2006
1
Negative Soria, V.,2010
rs1024582 CACNA1C CACNA1C-IT3 2(2/0/0) 1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
rs13440581 GPR50 GPR50-AS1 2(1/0/1) 1
Negative Thomson, P. A.,2005(b)
2
Negative Macintyre, D. J.,2010
Positive Thomson, P. A.,2005(b)
rs12966547 CCDC68 2(2/0/0) 2
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
Positive Andreassen OA, 2013
1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
rs878567 HTR1A 2(1/0/1) 1
Negative Kishi, T.,2011(b)
1
Positive Kishi, T.,2012(a)
rs41279104 NOS1 2(0/0/2) 1
Negative Silberberg, G.,2010
1
Negative Okumura, T., 2010
rs17025005 NPAS2 2(1/0/1) 1
Negative Mansour, H. A.,2009
1
Positive Soria, V.,2010
rs4279178 GABRB1 ADM 2(1/1/0) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs2279287 ARNTL 2(1/0/1) 1
Negative Mansour, H. A., 2006
1
Positive Soria, V.,2010
rs2072621 GPR50 GPR50-AS1 2(0/0/2) 1
Negative Thomson, P. A.,2005(b)
2
Negative Macintyre, D. J.,2010
Negative Thomson, P. A.,2005(b)
rs6295 HTR1A 2(2/0/0) 1
Negative Kishi, T.,2011(b)
1
Positive Kishi, T.,2012(a)
rs13025524 NPAS2 2(1/0/1) 1
Positive Mansour, H. A.,2009
1
Positive Soria, V.,2010
rs716934 DGKH 2(0/0/2) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs3749474 CLOCK TMEM165 2(0/0/2) 1
Negative Kishi, T.,2009(a)
2
Negative Kishi, T.,2011(c)
Negative Kishi, T.,2009(a)
rs11123857 NPAS2 2(1/0/1) 1
Positive Mansour, H. A.,2009
1
Positive Soria, V.,2010
rs1170098 DGKH 2(0/0/2) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs1701946 KLK8 KLK9 1(1/0/0) 1
Negative Izumi, A., 2008
1
Negative Izumi, A., 2008
rs5746826 TBX1 GNB1L 1(0/0/1) 1
Negative Funke, B. H., 2007
1
Negative Funke, B. H., 2007
rs10207288 ERBB4 1(0/0/1) 1
Negative Chen, P.,2012
1
Negative Chen, P.,2012
rs672607 BCL9 1(1/0/0) 1
Positive Li, J.,2011(b)
1
Positive Li, J.,2011(b)
rs16949856 1(0/0/1) 1
Negative Huang, J.,2010
1
Trend Huang, J.,2010
rs671056 BCL9 1(0/0/1) 1
Negative Li, J.,2011(b)
1
Negative Li, J.,2011(b)
rs3890379 CSNK1E 1(0/0/1) 1
Negative Matsunaga, S.,2012
1
Negative Matsunaga, S.,2012
rs3752826 YWHAE 1(0/0/1) 1
Positive Liu, J,2011(b)
1
Negative Liu, J,2011(b)
rs34041110 YWHAE 1(0/0/1) 1
Negative Liu, J,2011(b)
1
Negative Liu, J,2011(b)
rs10807187 MDGA1 1(0/0/1) 1
Negative Li, J.,2011(a)
1
Negative Li, J.,2011(a)
rs2131431 YWHAE 1(0/0/1) 1
Negative Liu, J,2011(b)
1
Negative Liu, J,2011(b)
rs4842318 PAWR 1(0/0/1) 1
Negative Kishi, T., 2008 (a)
1
Negative Kishi, T., 2008 (a)
rs17005769 PAWR 1(0/0/1) 1
Negative Kishi, T., 2008 (a)
1
Negative Kishi, T., 2008 (a)
rs7090018 FGFR2 1(0/0/1) 1
Negative Wang, T.,2012
1
Negative Wang, T.,2012
rs17014011 1(0/0/1) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs3829773 CSNK1D SLC16A3 1(0/0/1) 1
Negative Matsunaga, S.,2012
1
Negative Matsunaga, S.,2012
rs4726220 ACTR3B 1(0/1/0) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs2241802 FZD3 RNA5SP259 1(0/0/1) 1
Negative Hashimoto, R.,2005(b)
1
Negative Hashimoto, R.,2005(b)
rs16840252 CTLA4 1(0/0/1) 1
Positive Liu, J,2011(a)
1
Negative Liu, J,2011(a)
rs738149 CSF2RB 1(0/0/1) 1
Positive Chen, P.,2011
1
Positive Chen, P.,2011
rs1532976 YWHAE 1(0/0/1) 1
Negative Liu, J,2011(b)
1
Negative Liu, J,2011(b)
rs7326068 IFT88 1(0/0/1) 1
Negative Huang, J.,2010
1
Trend Huang, J.,2010
rs2463169 PAWR 1(0/0/1) 1
Negative Kishi, T., 2008 (a)
1
Negative Kishi, T., 2008 (a)
rs135764 CSNK1E 1(0/0/1) 1
Negative Matsunaga, S.,2012
1
Negative Matsunaga, S.,2012
rs1001021 MYO18B 1(0/0/1) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs3087243 CTLA4 1(0/0/1) 1
Negative Liu, J,2011(a)
1
Negative Liu, J,2011(a)
rs6900617 MDGA1 1(0/0/1) 1
Negative Li, J.,2011(a)
1
Negative Li, J.,2011(a)
rs2871042 TBX1 1(0/0/1) 1
Negative Funke, B. H., 2007
1
Negative Funke, B. H., 2007
rs2238777 TBX1 1(0/0/1) 1
Negative Funke, B. H., 2007
1
Negative Funke, B. H., 2007
rs231775 CTLA4 1(0/0/1) 1
Negative Liu, J,2011(a)
1
Negative Liu, J,2011(a)
rs17102287 FGFR2 1(0/0/1) 1
Negative Wang, T.,2012
1
Negative Wang, T.,2012
rs946903 BCL9 ACP6 1(0/0/1) 1
Negative Li, J.,2011(b)
1
Positive Li, J.,2011(b)
rs804831 MDGA1 1(0/0/1) 1
Negative Li, J.,2011(a)
1
Negative Li, J.,2011(a)
rs4140862 ANO2 1(0/0/1) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs11191454 AS3MT 1(1/0/0) 1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
rs909486 CSF2RB 1(0/0/1) 1
Positive Chen, P.,2011
1
Positive Chen, P.,2011
rs231777 CTLA4 1(1/0/0) 1
Positive Liu, J,2011(a)
1
Negative Liu, J,2011(a)
rs1883901 MDGA1 1(1/0/0) 1
Negative Li, J.,2011(a)
1
Negative Li, J.,2011(a)
rs7280842 SAMSN1 1(0/0/1) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs747226 TBX1 1(0/0/1) 1
Negative Funke, B. H., 2007
1
Negative Funke, B. H., 2007
rs9326555 BCL9 1(0/0/1) 1
Positive Li, J.,2011(b)
1
Negative Li, J.,2011(b)
rs9533042 DGKH 1(0/0/1) 1
Negative Zeng, Z.,2011
1
Negative Zeng, Z.,2011
rs839523 ERBB4 1(0/0/1) 1
Negative Chen, P.,2012
1
Negative Chen, P.,2012
rs352203 FZD3 1(0/0/1) 1
Negative Hashimoto, R.,2005(b)
1
Negative Hashimoto, R.,2005(b)
rs194487 CTNND2 1(0/0/1) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs4765914 CACNA1C 1(1/0/0) 1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
1
Positive Cross-Disorder Group of the Psychiatric Genomics Consortium,2013
rs2371276 ERBB4 1(0/0/1) 1
Negative Chen, P.,2012
1
Negative Chen, P.,2012
rs7769372 MDGA1 1(0/0/1) 1
Negative Li, J.,2011(a)
1
Negative Li, J.,2011(a)
rs2981578 FGFR2 1(0/0/1) 1
Negative Wang, T.,2012
1
Negative Wang, T.,2012
rs231779 CTLA4 1(1/0/0) 1
Positive Liu, J,2011(a)
1
Positive Liu, J,2011(a)
rs5746832 TBX1 GNB1L 1(1/0/0) 1
Negative Li, Y.,2011
1
Positive Li, Y.,2011
rs7678609 1(0/0/1) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs1541187 BCL9 1(0/0/1) 1
Negative Li, J.,2011(b)
1
Positive Li, J.,2011(b)
rs17101921 FGFR2 1(0/0/1) 1
Negative Wang, T.,2012
1
Negative Wang, T.,2012
rs278865 NR4A2 1(0/0/1) 1
Trend Huang, J.,2010
1
Negative Huang, J.,2010
rs135745 CSNK1E 1(0/0/1) 1
Negative Matsunaga, S.,2012
1
Negative Matsunaga, S.,2012
rs1801117 CSF2RB 1(0/0/1) 1
Negative Chen, P.,2011
1
Negative Chen, P.,2011
rs11875674 TXNL1 1(0/1/0) 1
Negative Huang, J.,2010
1
Negative Huang, J.,2010
rs2981427 FGFR2 1(0/0/1) 1
Negative Wang, T.,2012
1